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depscope/cran/karyotapR

karyotapR

cranv1.0.2

DNA Copy Number Analysis for Genome-Wide Tapestri Panels. Analysis of DNA copy number in single cells using custom genome-wide targeted DNA sequencing panels for the Mission Bio Tapestri platform. Users can easily parse, manipulate, and visualize datasets produced from the automated 'Tapestri Pipeline', with support for normalization, clustering, and copy

License MIT + file LICENSE0 versions1 maintainers24 deps78 weekly dl
joeymays/karyotapR
37
/ 100
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use with caution

[email protected] low health (37/100) — consider alternatives

  • Low health score (37/100)
Health breakdown0 – 100
10/25
maintenance
0/20
popularity
25/25
security
0/15
maturity
2/15
community
Vulnerabilities
0
none known

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Dependency Tree

License Audit

Dependencies (24)
SingleCellExperimentcirclizecliComplexHeatmapdbscandplyrfitdistrplusGenomeInfoDbGenomicRangesggplot2gtoolsIRangesmagrittrmethodspurrrrhdf5rlangS4VectorsstatsSummarizedExperimenttibbletidyrumapviridisLite
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First published · 2025-11-01 22:52:40

Last updated · 2025-11-01T21:40:08+00:00

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