{"package":"r-ruv","ecosystem":"conda","latest_version":"0.9.7.1","description":"Implements the 'RUV' (Remove Unwanted Variation) algorithms.  These algorithms attempt to adjust for systematic errors of unknown origin in high-dimensional data.  The algorithms were originally developed for use with genomic data, especially microarray data, but may be useful with other types of high-dimensional data as well.  These algorithms were proposed in Gagnon-Bartsch and Speed (2012) <doi:10.1093/nar/gkz433>, Gagnon-Bartsch, Jacob and Speed (2013), and Molania, et. al. (2019) <doi:10.1093/nar/gkz433>.  The algorithms require the user to specify a set of negative control variables, as described in the references.  The algorithms included in this package are 'RUV-2', 'RUV-4', 'RUV-inv', 'RUV-rinv', 'RUV-I', and RUV-III', along with various supporting algorithms.","license":"GPL-2.0-or-later","license_risk":"unknown","commercial_use_notes":"verify manually — license not parseable / not declared.","homepage":"http://www-personal.umich.edu/~johanngb/ruv/","repository":"","downloads_weekly":561,"health":{"score":49,"risk":"high","breakdown":{"maintenance":10,"popularity":3,"security":25,"maturity":9,"community":2},"deprecated":false,"max_score":100},"vulnerabilities":{"count":0,"critical":0,"high":0,"medium":0,"low":0,"details":[]},"versions":{"latest":"0.9.7.1","total_count":3,"recent":["0.9.6","0.9.7","0.9.7.1"]},"metadata":{"deprecated":false,"deprecated_message":null,"maintainers_count":1,"first_published":"2021-05-26 22:17:45.224000+00:00","last_published":"2025-09-24 12:42:30.737000+00:00","dependencies_count":0,"dependencies":[]},"github_stats":null,"bundle":null,"typescript":null,"known_issues":{"bugs_count":0,"bugs_severity":{},"status_breakdown":{},"link":null,"scope":"none"},"historical_compromise":null,"recommendation":{"action":"use_with_caution","issues":["Moderate health score (49/100) — verify manually"],"use_version":"0.9.7.1","version_hint":null,"summary":"r-ruv@0.9.7.1 low health (49/100) — consider alternatives"},"version_scoped":null,"requested_version":null,"_cache":"miss","_response_ms":512,"_powered_by":"depscope.dev — free package intelligence for AI agents","typosquat":{"is_suspected":false},"maintainer_trust":{"available":false},"malicious":{"is_malicious":false},"scorecard":{"available":false},"quality":{"available":false},"version_history_summary":{"total_versions":3,"first_release_age_days":1801,"last_release_days_ago":220,"avg_days_between_releases":900,"release_velocity":"moderate"}}