{"package":"r-ashr","ecosystem":"conda","latest_version":"2.2_63","description":"The R package 'ashr' implements an Empirical Bayes approach for large-scale hypothesis testing and false discovery rate (FDR) estimation based on the methods proposed in M. Stephens, 2016, \"False discovery rates: a new deal\", <DOI:10.1093/biostatistics/kxw041>. These methods can be applied whenever two sets of summary statistics---estimated effects and standard errors---are available, just as 'qvalue' can be applied to previously computed p-values. Two main interfaces are provided: ash(), which is more user-friendly; and ash.workhorse(), which has more options and is geared toward advanced users. The ash() and ash.workhorse() also provides a flexible modeling interface that can accomodate a variety of likelihoods (e.g., normal, Poisson) and mixture priors (e.g., uniform, normal).","license":"GPL-3.0-or-later","license_risk":"unknown","commercial_use_notes":"verify manually — license not parseable / not declared.","homepage":"https://github.com/stephens999/ashr","repository":"","downloads_weekly":1872,"health":{"score":52,"risk":"high","breakdown":{"maintenance":10,"popularity":6,"security":25,"maturity":9,"community":2},"deprecated":false,"max_score":100},"vulnerabilities":{"count":0,"critical":0,"high":0,"medium":0,"low":0,"details":[]},"versions":{"latest":"2.2_63","total_count":7,"recent":["2.0.5","2.2_32","2.2_39","2.2_40","2.2_47","2.2_54","2.2_63"]},"metadata":{"deprecated":false,"deprecated_message":null,"maintainers_count":1,"first_published":"2021-05-26 05:44:26.728000+00:00","last_published":"2025-09-17 14:01:29.291000+00:00","dependencies_count":0,"dependencies":[]},"github_stats":null,"bundle":null,"typescript":null,"known_issues":{"bugs_count":0,"bugs_severity":{},"status_breakdown":{},"link":null,"scope":"none"},"historical_compromise":null,"recommendation":{"action":"safe_to_use","issues":[],"use_version":"2.2_63","version_hint":null,"summary":"r-ashr@2.2_63 is safe to use (health: 52/100)"},"version_scoped":null,"requested_version":null,"_cache":"hit","_response_ms":0,"_powered_by":"depscope.dev — free package intelligence for AI agents","typosquat":{"is_suspected":false},"maintainer_trust":{"available":false},"malicious":{"is_malicious":false},"scorecard":{"available":false},"quality":{"available":false},"version_history_summary":{"total_versions":7,"first_release_age_days":1802,"last_release_days_ago":226,"avg_days_between_releases":300,"release_velocity":"moderate"}}